A method and apparatus for exactly compensating for a track zero position when copying a reference servo pattern in a disc drive adopting a reference servo track copying method. The method of compensating for a track zero position in a reference servo track copy system for copying a reference servo pattern in a head disc assembly into which a reference disc, on which the reference servo pattern is recorded, produced offline and at least one blank disc are assembled, includes: searching for a collision position of an actuator arm against a stopper for limiting the displacement of the actuator arm on the reference servo pattern; calculating an optimal track zero position based on the searched collision position; and copying the reference servo pattern on all disc surfaces from the calculated optimal track zero position.