A solid-oxide fuel cell system having a compact, highly space-efficient basal manifold for conveying high temperature air, exhaust, and hydrogen-rich reformate fuel to and from the core components of the system. The manifold is a three-dimensional assembly of plates and partitioned elements which are easily and inexpensively formed. When assembled, the manifold comprises a network of passageways which allow for the mounting, close-coupling, and integration of critical fuel cell system components, including heat exchangers, a tail gas combustor and fuel reformer, solid-oxide fuel cell stacks, check valves, and oxygen scavengers.