An automated multiple point fastener driving system is disclosed for driving fasteners into a plurality of structural elements for connecting the elements together while the elements are substantially continuously moving along a path The automated multiple point fastener driving system includes a frame with the path extending through the frame for movement of structural elements, a moving assembly for moving a plurality of structural elements along the path in a substantially continuous manner, an entry clamping assembly for clamping together the structural elements as the elements move substantially continuously along the path, an alignment assembly for aligning at least one edge of the plurality of structural elements as the elements move substantially continuously along the path, and fastener driving assembly for driving fasteners into the plurality of structural elements as the elements move substantially continuously along the path.