A fuel cell power plant (19, 19a) has a plurality of fuel cells (70, 70a, 70c) arranged in a stack (20, 20c), each fuel cell having porous, at least partially hydrophilic water transport plates (75, 81) with fuel (74) and oxidant (82) reactant gas channels, there being water channels (78, 85, 78a, 85a, 78c, 85c) exchanging water with the water transport plates. On shut down, water is retained in the water channels and water transport plates by means of either a micro vacuum pump (46), one or two valves (89, 90, 118, 120), a check valve (95, 99), capillary force in the water channels to prevent water from entering the reactant channels which, if frozen, could block flow of reactant gas upon startup.