Disclosed is a method of estimating repeatable runout (RRO) for a disk drive. The method includes: determining a plurality of position error signal (PES) values for a plurality of servo wedges of a track of a disk; and estimating repeatable runout (RRO) in the PES values for the servo wedges of the track by averaging determined PES values over a pre-determined number of revolutions of the disk of the disk drive and scaling the averaged PES values by a pre-determined ratio of the variance of non-repeatable runout (NRRO) to the variance of an optimal estimation of the RRO for the disk drive.