A control circuit having frequency modulation is used for reducing the EMI of a power converter. A switching circuit is couple to a feedback circuit to generate a switching signal for regulating an output of the power converter. A first oscillator is equipped to determine a switching frequency of the switching signal. A second oscillator is coupled to the first oscillator to modulate the switching frequency of the switching signal for reduce the EMI of the power converter. A programmable resistor is designed to attenuate the feedback signal of the feedback circuit. The resistance of the programmable resistor is controlled by the output of the second oscillator. Therefore, the output power and the output voltage can be kept constant when the switching frequency is modulated.