A system and method for programmatically analyzing and modifying a graphical program. The graphical program may be stored in a memory. The graphical program may then be programmatically analyzed. In various embodiments, the graphical program may be a graphical program that performs any function for any application, and the graphical program may be analyzed to determine any information or characteristics regarding the graphical program. One or more suggested modifications to the graphical program may be displayed based on the programmatic analysis performed on the graphical program. The user may be able to select which of the suggested modifications to automatically apply to the graphical program. The graphical program may then be programmatically modified to implement the one or more suggested modifications selected by the user.