Methods of controlling seeking of a transducer that is adjacent to a rotatable disk in a disk drive are disclosed. The methods may include accelerating the transducer radially across the rotatable disk from an initial track on the rotatable disk toward a destination track on the rotatable disk, estimating a deceleration switching position/velocity point, estimating a maximum deceleration position/velocity point following the deceleration switching position/velocity point, and estimating a deceleration current required to decelerate the transducer from a non-zero velocity at the maximum deceleration position/velocity point to zero velocity at the destination track. The estimated deceleration current is compared to a maximum available deceleration current, and responsive to a determination that the current required to decelerate the transducer from the maximum deceleration point to the destination track exceeds the maximum available deceleration current, the estimated deceleration switching point is adjusted. Related disk drive apparatus are also disclosed.